Imephu yokushisa
Ifayela ledatha le-matrix lisetshenziselwa ukudweba kwemephu yokushisa, engahlunga, ijwayele kanye nedatha ye-matrix yeqoqo.Isetshenziswa kakhulu ekuhlaziyweni kweqoqo leleveli yesisho sofuzo phakathi kwamasampuli ahlukene.
Isichasiselo seGene
Isichasiselo somsebenzi we-Gene senziwa ngokwenza imephu ukulandelana kwefayela le-FASTA ngokumelene nesizindalwazi esihlukahlukene.
Isichasiselo seGene
Ithuluzi Lokusesha Lokuqondanisa Kwasendaweni Okuyisisekelo
CDS_UTR_Prediction
Leli thuluzi lidizayinelwe ukubikezela izifunda zekhodi (CDS) nezifunda ezingafaki amakhodi (i-UTR) ngokulandelana okunikiwe okulotshiwe okusekelwe ekuqhumeni ngokumelene nesizindalwazi samaprotheni esaziwayo kanye nokubikezela kwe-ORF.
Isakhiwo saseManhattan
Isakhiwo seManhattan sinika amandla ukuboniswa kwedatha ngenani elikhulu lamaphuzu wedatha.Ivame ukusetshenziswa ezifundweni ze-genome-wide association (GWAS).
Ama-Circos
Umdwebo we-CIRCOS unika amandla ukwethulwa okuqondile kokusatshalaliswa kwe-SNP, InDeL, SV, CNV ku-genome.
GO_Enothisa
I-TopGO iyithuluzi elenzelwe ukunothisa ukusebenza.Iphakheji le-TopGO-Bioconductor liqukethe ukuhlaziywa kwesisho esihlukile, ukuhlaziya okunothisa kwe-GO kanye nokubonwa kwemiphumela.Izokhiqiza ifolda enomphumela obizwa ngokuthi "Igrafu", equkethe imiphumela ye-topGO_BP, topGO_CC kanye ne-topGO_MF.
WGCNA
I-WGCNA iyindlela esetshenziswa kakhulu yezimayini yedatha yokuthola amamojula wohlobo lokukhuluma ngokubambisana.Isebenza kudathasethi yezinkulumo ezihlukahlukene okuhlanganisa idatha ye-microarray kanye nedatha yesisho sofuzo esivela ekulandelaneni kwesizukulwane esilandelayo.
I-InterProScan
Ukuhlaziywa nokuhlukaniswa kwe-InterPro amaprotheni
GO_KEGG_Enothisa
Leli thuluzi liwumklamo wokukhiqiza i-histogram yokucebisa i-GO, i-histogram yokucebisa i-KEGG kanye nendlela yokucebisa ye-KEGG ngokusekelwe kusethi yofuzo enikeziwe kanye nesichasiselo esihambisanayo.