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Wararka

T2T GENOME ASSEMBLY, GAP FREE GENOME

1stLaba nooc oo bariis ah1

Ciwaanka: Isku imaatinka iyo Ansixinta Labada Genom ee Tixraaca bilaa Farqiga ah ee Xian/indica Bariiska ayaa daaha ka qaaday aragtida Dhismaha Centromere ee dhirta

Doi:https://doi.org/10.1101/2020.12.24.424073

Waqtiga la dhejiyay: Janaayo 01, 2021.

Machadka: Huazhong Agricultural University, Shiinaha

Qalabka

O. sativa xian/indicaNoocyada bariiska 'Zhenshan 97 (ZS97)' iyo 'Minghui 63 (MH63)

Istaraatiijiyada isku xigxiga

NGS akhriya + HiFi akhriya + CLR akhriya + BioNano + Hi-C

Xogta:

ZS97: 8.34 Gb (~ 23x) HiFi wuxuu akhriyaa + 48.39 Gb (~ 131x) CLR akhriya + 25 Gb (~ 69x) NGS + 2 Unugyada BioNano Irys

MH63: 37.88 Gb (~ 103x) HiFi akhriya + 48.97 Gb (~132x) CLR akhriya + 28 Gb(~76x) NGS + 2 BioNano Irys unugyo

Jaantuska-1

Jaantuska 1 Laba genome oo bariis ah oo aan faraq lahayn (MH63 iyo ZS97)

2ndMuuska Genome2

Ciwaanka: Telomere-ilaa-telomere koromosoomyada muuska ee aan gaabnayn iyadoo la isticmaalayo isku xigxiga nanopore

Doi:https://doi.org/10.1101/2021.04.16.440017

Waqtiga la dhejiyay: Abriil 17, 2021.

Machadka: Jaamacadda Paris-Saclay, Faransiiska

Qalabka

Haploid laba jibaaranMuuse acuminatasppmalaccensis(DH-Pahang)

Istaraatiijiyada isku xigxiga iyo xogta:

Qaabka HiSeq2500 PE250 + MinION/ PromethION (93Gb,~200X)+ Khariidadda indhaha (DLE-1+BspQ1)

Shaxda 1 Isbarbardhigga Musa acuminata (DH-Pahang) genome assemblies

Shaxda1-Isbarbardhigga-GRCh38-iyo-T2T-CHM13-ururada-genome-ga
Jaantuska-Musa-genomes-Architecture-isbarbardhigga

Jaantuska 2 Musa genomes isbarbardhigga naqshadaha

3rdPheodactylum tricornutum genome3

Ciwaanka: Shirarka genome-ka Telomere-to-telomere eeP
haeodactylum tricornutum

Doi:https://doi.org/10.1101/2021.05.04.442596

Waqtiga la dhejiyay: Meey 04, 2021

Machadka: Western University, Canada

Qalabka

Pheodactylum tricornutum(Ururinta Dhaqanka Algae iyo Protozoa CCAP 1055/1)

Istaraatiijiyada isku xigxiga iyo xogta:

1 Oxford Nanopore minION unugga qulqulka + 2 × 75-dhamaadka-dhamaadka wax soo saarka NextSeq 550

Jaantus-shaqo-socodka-telomere-ilaa-telomere-genome-ururka-1-1024x740

Jaantuska 3 Socodka shaqada ee isu-ururinta genome-to-telomere

4thHuman CHM13 genome4

Ciwaanka: Isku xigxiga oo dhammaystiran ee hiddo-wadaha aadanaha

Doi:https://doi.org/10.1101/2021.05.26.445798

Waqtiga la dhejiyay: Meey 27, 2021

Machadka: Machadka Qaranka ee Caafimaadka (NIH), USA

Qalabka: xariiqda gacanta CHM13

Istaraatiijiyada isku xigxiga iyo xogta:

30 × PacBio wareegtada isku xigxiga isku raacitaanka (HiFi), 120 × Oxford Nanopore taxanaha akhriska aadka u dheer, 100 × Illumina PCR-taxane bilaash ah (ILMN) , 70 × Illumina / Arima Genomics Hi-C (Hi-C), Khariidadaha indhaha ee BioNano, iyo Strand-seq

Shaxda 2 Isbarbardhigga GRCh38 iyo T2T-CHM13

Shaxda-isbarbardhigga-Musa-acuminata-DH-Pahang-ururada-genome-ga

Tixraac

1.Sergey Nurk iyo al.Tixda dhamaystiran ee genome-ka aadanaha.bioRxiv 2021.05.26.445798;doi:https://doi.org/10.1101/2021.05.26.445798

2.Caroline Belser iyo al.Telomere-ilaa-telomere koromosoomyada muuska ee aan gaabska lahayn iyadoo la adeegsanayo isku xigxiga nanopore.bioRxiv 2021.04.16.440017;doi:https://doi.org/10.1101/2021.04.16.440017

3.Daniel J. Giguere iyo al.Kulanka genome-ka Telomere-to-telomere ee Pheodactylum tricornutum.bioRxiv 2021.05.04.442596;doi:https://doi.org/10.1101/2021.05.04.442596

4.Jia-Ming Song iyo al.Isu imaatinka iyo Ansixinta Labada Genom ee Tixraaca bilaa Farqiga ah ee Xian/indica Rice ayaa daaha ka qaaday aragtida Dhismayaasha Centromere ee Dhirta.bioRxiv 2020.12.24.424073;doi:https://doi.org/10.1101/2020.12.24.424073


Waqtiga boostada: Jan-06-2022

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