Platform | Library Size | Theoretical Data Kuburitsa (Per Cell) | Single-base Kururama | Applications |
Nanopore | 8Kb, 10kb, 20kb, Ultralong, cDNA-PCR | 70-90Gb/Sero | 85-92% | SV kufona, De novo, Yakazara-kureba kutevedzana, Iso-Seq, Gene annotation, Kuonekwa kweDNA methylation |
● Kupfuura makore mashanu 'ruzivo paPacBio sequencing chikuva nezviuru zvemapurojekiti akavharwa ane marudzi akasiyana.
● BMKGENE ishamwari yepamutemo yeOxford Nanopore, ine dual platform RNA/DNA certification.
● Kune mamodheru makuru evatevedzeri vane midziyo yakakwana uye yakakwana sequencing throughput.
● Kubva papuratifomu yeNanopore, zvinopfuura 10 mhuka nemiti Denovo tsvakurudzo dzakabudiswa mumagazini ane mukurumbira pasi rose.
Muenzaniso Type | Mari | Concentrtion(Qubit ®) | Volume | Kuchena | Vamwe |
Genomic DNA | Zvichienderana neData Inodiwa | ≥20ng/μl | ≥15μl | OD260/280=1.7-2.2; OD260/230≥1.5; Yakajeka peak pa260 nm, hapana kusvibiswa | Concentration inoda kuyerwa neQubit uye Qubit/Nanopore ≤ 2 |
Zvose RNA | ≥1.2μg | ≥100μg/μl | ≥15μl | OD260/280=1.7-2.5; OD260/230=0.5-2.5;hapana kusvibiswa | RIN kukosha ≥7.5 |
Data Quality Kuongororwa kweDNA Sample
Tafura 1. Nhamba dze data yakachena.
BMKID | rawSeqNum | rawSumBase | cleanSeqNum | cleanSumBase | cleanN50Len | cleanN90Len | cleanMeanLen | cleanMaxLen | cleanMeanQual |
DNA_BMK01 | 1,218,239 | 26.37 | 1,121,736 | 25.90 | 28,014 | 15,764 | 23,090 | 143,181 | 9 |
Dhata Yemhando Yekuongorora yeRNA Sample
Tafura 1. Nhamba dze data yakachena.
FileName | ClientID | ReadNum | BaseNum | N50 | MeanLength | MaxLength | MeanQscore |
RNA_BMK001 | C2 | 8,947,708 | 4,047,230,083 | 398 | 452 | 129,227 | Q12 |
Mufananidzo 1. Verenga kureba kugoverwa
Mufananidzo 2. Kugoverwa kwehutano hwehutano hwe data yakachena
Mufananidzo 3. Kureba uye kugoverwa kwehutano hwehutano hwe data yakachena