ØIngamba nyinshi zikurikirana ziboneka kumigambi itandukanye yubushakashatsi
ØIndwara ya bagiteri yuzuye genome hamwe na 0 Gap yemewe.
ØInararibonye cyane muri bacteri genome ikorana na genome zirenga 10,000.
ØUmwuga nyuma yo kugurisha itsinda ryunganira tekinike ryujuje ibyifuzo byubushakashatsi bwihariye.
UrukurikiraneIngamba | Isomero | Ubwiza bufite ireme | Bigereranijwe guhindukira |
Nanopore 100X + Illumina 50X | Nanopore 20K PE150 | 0 Icyuho | Iminsi 30 |
PacBio HiFi 30X | PacBio 10K |
üKugenzura ubuziranenge bwamakuru
üInteko rusange
üIsesengura ryibigize genome
üImikorere ya gen
üKugereranya genomic igereranya
KuriIbikuramo ADN:
Ubwoko bw'icyitegererezo | Umubare | Kwibanda | Isuku |
Ibikuramo ADN | Μ 3 μg | Ng 20 ng / μl | OD260 / 280 = 1.6-2.5 |
Ku byitegererezo by'inyama:
Ubwoko bw'icyitegererezo | Basabwe kuvura icyitegererezo | Icyitegererezo cyo kubika no kohereza |
Indwara ya bagiteri | Itegereze bagiteri munsi ya microscope hanyuma ukusanye za bagiteri mugice cyazo Hindura umuco wa bagiteri (urimo selile zigera kuri 3-4.5e9) muri eppendorf ya 1.5 cyangwa 2.(Komeza ku rubura) Centrifuge umuyoboro muminota 1 kuri 14000 g kugirango ukusanye bagiteri kandi ukureho supernatant witonze Funga umuyoboro hanyuma uhagarike bagiteri muri azote yuzuye byibuze 30 min.Bika umuyoboro muri -80 frigo. | Hagarika icyitegererezo muri azote yuzuye mumasaha 3-4 hanyuma ubike muri azote yuzuye cyangwa -80 kugirango ubike igihe kirekire.Icyitegererezo cyoherezwa hamwe na ice-ice irakenewe. |
1.Circos ya genomeri
2.Kode yo guhanura gene
3.Gereranya genomics igereranya: igiti cya phylogeneque