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DNA / RNA Sequencing - Nanopore Sequencer

Kutsatizana kwa ONT ndi molekyu imodzi yeniyeni yotsatizana ndi teknoloji yotsatizana ndi nanopores, ndondomeko yotsatizana ya nsanja iliyonse ndi yofanana.DNA/RNA yokhala ndi mizere iwiri imamanga ku mapuloteni a nanoporous ophatikizidwa mu biofilm ndikusungunula motsogozedwa ndi mapuloteni amoto, pansi pa kusintha kwa magetsi kuchokera mbali zonse za biofilm, zingwe za DNA/RNA zimadutsa mu protein ya nanopore panthawi inayake. mlingo.Chifukwa cha kusiyana kwa mankhwala azitsulo zosiyanasiyana pa DNA / RNA strand, pamene maziko amodzi kapena molekyulu ya DNA imadutsa mumsewu wa nanopore, zidzachititsa kusintha kwa zizindikiro zosiyanasiyana zamagetsi.Pozindikira ndi kufananiza ndi zizindikirozi, mitundu yofananira yoyambira imatha kuwerengedwa, ndipo kuzindikira nthawi yeniyeni yotsatizana kumatha kutha.


Tsatanetsatane wa Utumiki

Zotsatira za Demo

Tsatanetsatane wa Utumiki Features

nsanja

Kukula kwa Library

Theoretical Data Yield (Per Cell)

Kulondola Pamodzi

Mapulogalamu

Nanopore

8Kb, 10kb, 20kb, Ultralong, cDNA-PCR

70-90Gb / Cell

85-92%

Kuitana kwa SV, De novo, Kutsatizana kwautali, Iso-Seq, ndemanga ya Gene, Kuzindikira kwa DNA methylation

Ubwino wa Utumiki

● Kupitilira zaka 5 papulatifomu yotsatizana ya PacBio yokhala ndi mapulojekiti masauzande ambiri otsekedwa okhala ndi mitundu yosiyanasiyana.
● BMKGENE ndi mnzawo wovomerezeka wa Oxford Nanopore, wokhala ndi ziphaso zapawiri za RNA/DNA.
● Pali mitundu yambiri ya sequencers yokhala ndi zida zonse ndi ndondomeko yokwanira yotsatizana.
● Malingana ndi nsanja ya Nanopore, kafukufuku woposa 10 wa zinyama ndi zomera za Denovo zasindikizidwa m'magazini otchuka padziko lonse lapansi.

Zitsanzo Zofunika


Mtundu Wachitsanzo

Ndalama

Concentrtion(Qubit ®)

Voliyumu

Chiyero

Ena

Genomic DNA

Zimatengera Zofunikira pa Data

 ≥20ng/μl

≥15μl

OD260/280=1.7-2.2;

OD260/230≥1.5;

Chotsani pachimake pa 260 nm, palibe kuipitsidwa

Kukhazikika kuyenera kuyezedwa ndi Qubit ndi Qubit/Nanopore ≤2

Mtengo wa RNA

≥1.2μg

≥100μg/μl

≥15μl

OD260/280=1.7-2.5;

OD260/230=0.5-2.5;palibe zoipitsidwa

Mtengo wa RIN ≥7.5

 

Njira ya utumiki

kukonzekera chitsanzo

Kukonzekera kwachitsanzo

Kukonzekera kwa Library

Kumanga laibulale

Kutsata

Kutsata

Kusanthula deta

Kusanthula deta

Chitsanzo cha QC

Kutumiza kwa polojekiti


  • Zam'mbuyo:
  • Ena:

  • Kuwunika Kwamtundu wa Deta wa Zitsanzo za DNA

    Table 1. Ziwerengero za deta yoyera.

    BMKID

    rawSeqNum

    rawSumBase

    cleanSeqNum

    cleanSumBase

    cleanN50Len

    cleanN90Len

    cleanMeanLen

    cleanMaxLen

    cleanMeanQual

    DNA_BMK01

    1,218,239

    26.37

    1,121,736

    25.90

    28,014

    15,764

    23,090

    143,181

    9

    Kuwunika kwa Ubwino wa Deta wa Zitsanzo za RNA

    Table 1. Ziwerengero za deta yoyera.

    Dzina lafayilo

    ClientID

    ReadNum

    BaseNum

    N50

    MeanLength

    MaxLength

    MeanQscore

    RNA_BMK001

    C2

    8,947,708

    4,047,230,083

    398

    452

    129,227

    Q12

    Chithunzi 1. Werengani kugawa kwautali

    A3

    Chithunzi 2. Kugawa kwapamwamba kwa deta yoyera

    A4

    Chithunzi 3. Kutalika ndi kugawa kwabwino kwa chiwerengero cha deta yoyera

    A5

    pezani mtengo

    Lembani uthenga wanu apa ndikutumiza kwa ife

    Titumizireni uthenga wanu: