● Kwarewa sosai: Sama da samfuran 200,000 an sarrafa su a cikin BMK waɗanda ke rufe nau'ikan samfuri daban-daban, gami da al'adun tantanin halitta, nama, ruwan jiki, da sauransu kuma sama da ayyukan mRNA-Seq sama da 7,000 da aka rufe waɗanda ke rufe wuraren bincike daban-daban.
● Tsarin kula da inganci mai mahimmanci: Mahimman matakan kula da inganci ta duk matakai ciki har da shirye-shiryen samfurin, shirye-shiryen ɗakin karatu, jerin abubuwa da bioinformatics suna ƙarƙashin kulawa mai zurfi don samar da sakamako mai kyau.
● Rubutun bayanai da yawa akwai don bayanin aiki da nazarin haɓakawa don cika burin bincike daban-daban.
● Bayan-sayar da sabis: Bayan-sayar da sabis na aiki na tsawon watanni 3 bayan kammala aikin, gami da bin diddigin ayyukan, harbin matsala, Q&A sakamakon, da sauransu.
Laburare | Dabarun jeri | An ba da shawarar bayanai | Kula da inganci |
Poly A ya wadata | Farashin PE150 | 6 gb | Q30≥85% |
Nucleotides:
Conc.(ng/μl) | Adadin (μg) | Tsafta | Mutunci |
≥ 20 | ≥ 0.5 | OD260/280=1.7-2.5 OD260/230=0.5-2.5 Iyakance ko babu furotin ko gurɓataccen DNA da aka nuna akan gel. | Don tsire-tsire: RIN≥6.5; Na dabbobi: RIN≥7.0; 5.0≥28S/18S≥1.0; iyakance ko babu hawan tushe |
Nama: Nauyi(bushe):≥1 g
* Don nama ƙasa da 5 MG, muna ba da shawarar aika samfurin nama daskararre (a cikin ruwa nitrogen).
Dakatar da salula:Ƙididdigar salula = 3×106- 1 × 107
*Muna ba da shawarar jigilar daskararrun cell lysate.Idan wannan tantanin halitta ya ƙidaya ƙasa da 5 × 105.
Samfuran jini:Girman ≥1 ml
Microorganism:Masa ≥ 1 g
Kwantena: 2 ml bututu centrifuge (Ba a ba da shawarar foil tin ba)
Alamar samfur: Ƙungiya+ kwafi misali A1, A2, A3;B1, B2, B3......
Jirgin ruwa:
Bioinformatics
Eukaryotic mRNA sequencing analysis aiki
Bioinformatics
ØRaw data ingancin iko
ØDaidaiton kwayoyin halitta
ØBinciken tsarin kwafi
ØƘididdigar magana
ØBinciken maganganu daban-daban
ØBayanin aiki da haɓakawa
1.mRNA Data Saturation curve
2.Bambance-bambancen maganganun magana-makircin volcano
3.Bayanin KEGG akan DEGs
4.Rarraba GO akan DEGs