●Dandalin:Illumina NovaSeq 6000, NovaSeq, HiSeq X Ten da BGI-DNB-T7
●Hanyoyin jeri:PE50, PE100, PE150, PE250
●Kula da ingancin ɗakunan karatu kafin tsarawa
●Jeri isar da bayanai da QC:isar da rahoton QC da ɗanyen bayanai a cikin tsarin fastq bayan lalatawa da tacewa Q30 yana karantawa.
●Ƙwararren sabis na Sequencing:abokin ciniki na iya zaɓar jeri ta hanya, tantanin halitta mai gudana ko adadin bayanai.
●Juyawa na dandamali:Ana iya canja wurin ɗakunan karatu na DNB zuwa dandamali na Illumina
●Ƙwarewa mai zurfi akan dandamalin jerin abubuwan Illumina:tare da dubban rufaffiyar ayyukan tare da nau'o'in nau'i daban-daban.
●Isar da rahoto na QC:tare da ma'auni masu inganci, daidaiton bayanai da aikin gaba ɗaya na aikin jeri.
●Babban tsarin jeri:tare da ɗan gajeren lokacin juyawa.
●Tsananin Kula da Inganci: muna aiwatar da ƙaƙƙarfan buƙatun QC don tabbatar da isar da sakamako mai inganci akai-akai.
Adadin Bayanai (X) | Hankali (qPCR/nM) | Ƙarar |
X ≤ 50 GB | ≥ 2 nM | ≥ 20 ml |
50 Gb ≤ X <100 Gb | ≥ 3 nM | ≥ 20 ml |
X ≥ 100 Gb | ≥ 4 nM | ≥ 20 ml |
Dandalin | Hankali (qPCR/nM) | Ƙarar |
HiSeq X Ten | ≥ 2 nM | ≥ 20 ml |
NovaSeq 6000 SP | ≥ 1 nM | ≥ 25 ml |
NovaSeq 6000 S4 | ≥ 1.5 nM | ≥ 25 ml |
NovaSeq X | ≥ 1.5 nM | ≥ 25 ml |
BGI-DNBSEQ-T7 | ≥ 1.5 nM | ≥ 25 ml |
Baya ga maida hankali da jimlar adadin, ana kuma buƙatar ƙirar kololuwar da ta dace.
Ana ba da rahoto kan ingancin ɗakin karatu kafin tsarawa, tantance adadin ɗakin karatu, da rarrabuwa.
Tebur 1. Ƙididdiga akan jerin bayanai.
Samfurin ID | BMKID | Raw yana karantawa | Raw Data (bp) | Tsabtace karantawa (%) | Q20(%) | Q30(%) | GC(%) |
C_01 | BMK_01 | 22,870,120 | 6,861,036,000 | 96.48 | 99.14 | 94.85 | 36.67 |
C_02 | BMK_02 | 14,717,867 | 4,415,360,100 | 96.00 | 98.95 | 93.89 | 37.08 |
Hoto 1. Rarraba inganci tare da karantawa a cikin kowane samfurin
Hoto 2. Tushen rarraba abun ciki
Hoto 3. Rarraba abubuwan da aka karanta a cikin jerin bayanai