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Illumina pre-made libraries

Illumina sequencing technology, based on Sequencing by Synthesis (SBS), is a globally embraced NGS innovation, responsible for generating over 90% of the world’s sequencing data. The principle of SBS involves imaging fluorescently labelled reversible terminators as each dNTP is added, and subsequently cleaved to allow the incorporation of the next base. With all four reversible terminator-bound dNTPs present in each sequencing cycle, natural competition minimizes incorporation bias. This versatile technology supports both single-read and paired-end libraries, catering to a range of genomic applications. Illumina sequencing’s high-throughput capabilities and precision position it as a cornerstone in genomics research, empowering scientists to unravel the intricacies of genomes with unmatched detail and efficiency.

Our pre-made library sequencing service enables customers to prepare sequencing libraries from diverse sources (mRNA, whole genome, amplicon, 10x libraries, among others). Subsequently, these libraries can be shipped to our sequencing centers for quality control and sequencing in Illumina platforms.


Service Details

Demo Result

Features

● Platforms: Illumina NovaSeq 6000 and NovaSeq  X

● Sequencing modes: PE150 and PE250

● Quality control of libraries before sequencing

● Sequencing data delivery and QC: delivery of QC report and raw data in fastq format after demultiplexing and filtering Q30 reads.

 

 

Service Advantages

●  Versatility of Sequencing services: the customer may choose to sequence by lane, flow cell, or by amount of data required (partial lane sequencing).

● Extensive experience on Illumina sequencing platform:  with thousands of closed projects with various species. 

● Delivery of sequencing QC report: with quality metrics, data accuracy and overall performance of the sequencing project.

● Mature sequencing process:  with short turn-around time.

● Rigorous Quality Control: we implement strict QC requirements to guarantee the delivery of consistently high-quality results.

 

 

Sample Platforms

Platform

Flow Cell

Sequencing mode

Unit

Estimated output

NovaSeq X

10B (8 lanes)

PE150

Single Lane

Partial Lane

375Gb /Lane

25B ( lanes)

PE150

Single Lane

Partial Lane

1000 Gb/Lane

NovaSeq 6000

SP Flow cell (2 lanes)

PE250

Flow Cell

Single Lane

Partial Lane

~162-200Gb/ Lane

S4 Flow cell (4 lanes)

PE150

Flow Cell

Single Lane

Partial Lane

~800 Gb/Lane

Sample Requirements

 

Data Amount (X) /Platform

Concentration (qPCR/nM)

Volume

Partial Lane Sequencing

X ≤ 50 Gb

≥ 2 nM

≥ 20 μl

50 Gb ≤ X < 100 Gb

≥ 3 nM

≥ 20 μl

X ≥ 100 Gb

≥ 4 nM

≥ 20 μl

Lane Sequencing

NovaSeq 6000 SP

≥ 1 nM

≥ 25 μl

NovaSeq 6000 S4

≥ 1.5 nM

≥ 25 μl

NovaSeq X

≥ 1.5 nM

≥ 25 μl

In addition to concentration and total amount, a suitable peak pattern is also required.

Please reach out to us if your samples don't meet the starting material requirements.

Service Workflow

sample preparation

Library quality control

Sequencing

Sequencing

Data analysis

Data quality control

Sample QC

Project delivery


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  • Library QC report

    A report on the quality of the library is provided before sequencing, assessing library amount, and fragmentation.

     

    Sequencing QC report

     

    Table 1. Statistics on sequencing data.

    Sample ID

    BMKID

    Raw reads

    Raw Data (bp)

    Clean reads (%)

    Q20(%)

    Q30(%)

    GC(%)

    C_01

    BMK_01

    22,870,120

    6,861,036,000

    96.48

    99.14

    94.85

    36.67

    C_02

    BMK_02

    14,717,867

    4,415,360,100

    96.00

    98.95

    93.89

    37.08

    Figure 1. Quality distribution along reads in each sample

    A9

    Figure 2. Base content distribution

    A10

    Figure 3. Distribution of read contents in sequencing data

    A11

     

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